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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789854.1_cds_XP_016498688.1_1198
CDS Infomation

[gene=LOC107817394] [db_xref=GeneID:107817394] [protein=WD repeat-containing protein 43-like] [partial=3'] [protein_id=XP_016498688.1] [location=join(34710..34799,34878..35021,35353..35468,36253..36407,36768..36856,37006..37552,38525..38629,39442..39605,39705..39784,40570..40678,43003..43077,43159..>43218)] [gbkey=CDS]
Sequence

ATGGGCACAACAAATATAAGGGACATTTTGACTTGTTTGAGTCCCTCTCTGGACTTCTTT
GCTATCAGTTCTGGTGATGGCCGTATCAAGATATGGGATACAGTGAAGGGTCAGGTACAA
ACGGAGTTTGCAGATATTGTGTCAACTGAGACAACAGCAAGCTTGTTTACTAAGCCAGGA
GGTCATCTTTCTATGGATTATACTTGCATGAAGTGGTTATCATGTGACAGAAAGAAAAAA
AGGAAGCTTGGAACTTCATTATTGGTTTTAGGTACAGGCAGTGGTGATGTTTTGGCTCTA
GATGTATCTGCAGGTCATCTCAAATGGAGATTTACTGATTGCCATCCTGGCGGTGTCAAT
GCCATCTCATTCCCTTCACATGGTTCATTCATTTACACGGCTGGTGCTGATGGACTGGTT
TGCAAAATTGACTCCATGTCGGGGAACTTACTGCATAAGTTTAAAGCTTCCACTAAAGCA
ATATCATCTTTATCCGTTTCGTCAGATGGGAAAATGTTAGCAACAGCAACTTCTCAGTTG
AAAATTTTCAATTGCTTGGATGACAAAAAGCTCCAGAAGTTTTCAGGCCACCCTGGGGCT
GTTCGGCGTATGGTTTTCTCTGAAGATGGGAGACATGTTCTTTCTTCTGCTGTTGGTGAC
CGACACGTAGCAGTTTGGAAGTTAGATGGTAGCAAAAAGAAATCGGTGTGCTGCTTGCTT
CCAATGGATCACCCTGCTGTCTTTTTGGATAGTTACTGCATTAAATCTGGAGTTGAAAAT
GATGCAAGTTTAGGTGTTTTGGCCATTTCAGAAATTGGTGTTTGCTACTTTTGGCATGGA
AAGAGTTTTGAGGAATTGCACAATTTGAAGCCCACAAAAATATGCGCATCTTTAGATGAG
GAAATTCTGAAGAAACATAAAGAAGCCGTGCATAGTATTTTTTCGGCAAAATTGCAATCT
ATTGGCACATCTGGTTCCGGTCATATGTTTGTTGCATATGGCTTGTTAATAAAACCATCA
TTTGAAAAAGTTATGGTGCAGCCTGGGGCGGATATGAGATTAAAAAGTTCACTTGACGGG
ATCCTTCTACCCTTCAGTCAATCCCGCAAATCTAAACAAGCATCTAACACTCAGAGTCAG
GTTACTGCTCTCGATTGTGCAAATGCAGAGGGTGCCTTACTTCCTTTGCCTAAGATTCTT
GATCAGGTTGGTGTCGAGCATGGAATTAAGCCCACAGTGAGCAAAGATGTCATTGGTAAA
CAAGGTGAAGATGAGGTGACAATTTGCATGGAGGACCAGTTAAGATCCATAGGTATAATT
AGCAGTGACTATGATCTCTCGCCTAGCTCAATTCTTGATCCTAAGATTTTGAAAGGAATA
AGTGTTGATGCTAGTATGCCACCGAAGAAGATGAAATCAGCTGTTTTATCTTTGGAATCG
CCTGATGCTTACAACTTATTGAATGCCTTGGTGGCTGCATGGCAGTCCAGATCAAGCATG
GGAAGACATGTTCTTCCATGGATATACTGTATATTGGTGAACCACAATGAATTTGTTACA
TCGCAGGAACCACCGACTCTTCTGGATTCTTTGAACAAGCTTACCAGGTCAAAGGTGGCA
GCCCTGAGCTGTTTATTGCAGTTATCTGGCCGTTTGCAGCTCGTAATGGCACAGATCGAG
AAGGCTGATAATAGGAAAAGCCCCGCACTAACACTCGAGGGGCGGATGGATGAA

Peptide Sequence

PEP ID

XP_016498688.1
PEP Infomation

PREDICTED: WD repeat-containing protein 43-like, partial [Nicotiana tabacum]
Sequence

MGTTNIRDILTCLSPSLDFFAISSGDGRIKIWDTVKGQVQTEFADIVSTETTASLFTKPG
GHLSMDYTCMKWLSCDRKKKRKLGTSLLVLGTGSGDVLALDVSAGHLKWRFTDCHPGGVN
AISFPSHGSFIYTAGADGLVCKIDSMSGNLLHKFKASTKAISSLSVSSDGKMLATATSQL
KIFNCLDDKKLQKFSGHPGAVRRMVFSEDGRHVLSSAVGDRHVAVWKLDGSKKKSVCCLL
PMDHPAVFLDSYCIKSGVENDASLGVLAISEIGVCYFWHGKSFEELHNLKPTKICASLDE
EILKKHKEAVHSIFSAKLQSIGTSGSGHMFVAYGLLIKPSFEKVMVQPGADMRLKSSLDG
ILLPFSQSRKSKQASNTQSQVTALDCANAEGALLPLPKILDQVGVEHGIKPTVSKDVIGK
QGEDEVTICMEDQLRSIGIISSDYDLSPSSILDPKILKGISVDASMPPKKMKSAVLSLES
PDAYNLLNALVAAWQSRSSMGRHVLPWIYCILVNHNEFVTSQEPPTLLDSLNKLTRSKVA
ALSCLLQLSGRLQLVMAQIEKADNRKSPALTLEGRMDE

Transcript Sequence

Gene sequence data has not been registered.